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    - Molecular dynamics simulations of a charactertic DPC micelle in water. Abel S., Dupradeau F-Y,        and Marchi M.. J. Chem. Theory Comput. (2012), 8, 11, 4610–4623 (DOI: 10.1021/ct3003207) (        Supp. Info)
 - Molecular Dynamics Simulations of Cytochrome c unfolding in AOT Reverse Micelles: the first steps. Abel S.; Waks M. and Marchi M. Eur. Phys. J. E, (2010), 32, 4, 399-409 (DOI: 10.1140/epje/i2010-10635-x)  
- Molecular Simulations of Dodecyl-β-Maltoside Micelle in Water: Headgroup Conformation and the Force Field Parameters. Abel S., Dupradeau F-Y, Raman E. P., Mackerell Jr. A. D.,M. Marchi. J. Phys. Chem. B, (2011), 115, 3, 487-499 (DOI: 10.1021/jp109545v) (Supp. Info)
- Atomistic simulations of spontaneous formation and structural properties of linoleic micelles in water.  Abel S.; Attia, J.; Rémita, S.; Marchi, M.; Urbach W.  and Goldmann, G.; Chem.Physics lett. (2009)   481,1-3, 124-129(DOI: 10.1140/epje/i2010-10635-x)  
    - Effect of Surfactant Conformation on the Structures of Small Size Non Ionic Reverse Micelles: A Molecular Dynamics Simulation Study. Abel S.; Waks M.; Marchi M.; Urbach W.; Langmuir, (2006), 22, 22, 9112-9120 (DOI: 10.1021/la060978v)  
- Structure, Stability, and Hydration of a Polypeptide in AOT Reverse Micelles. Abel S.; Waks M.; Urbach W.; Marchi M. J. Am. Chem. Soc. (2006), 128, 2,  382-383 (DOI: 10.1021/ja053043u) (Supp. info)  
   - Molecular Modeling and Simulations of AOT-Water Reverse Micelles in Isooctane: Structural and Dynamic Properties. Abel S.; Sterpone, F.; Bandyopadhyay, S.; Marchi, M. J. Phys. Chem. B, (2004), 108, 50, 19458-19466 (DOI: 10.1021/jp047138e) (Supp. Info)   II. Posters  (Updated 11/10/2015)
- Molecular Simulations of Dodecyl-D-Maltoside Micelles in Water: Influence of the Headgroup Conformation and the Force Field Parameters.54th Biophysical Society Meeting, San-Franciso, 98, 3, Supplement 1, (2010), 567a (DOI:10.1016/j.bpj.2009.12.3074)  
- Molecular Modeling of Proteins in AOT Reverse Micelles: Horse Cytochrome C. M. Waks et M. Marchi " 16eme Congrès du Groupe Graphisme et Modélisation Moléculaire”, Mittelwihr, 5 – 7 May 2009 - Atomistic Molecular Dynamics Simulations of Spontaneous Aggregation Of Linoleic Acid Micelles In Water Abel, S. et al. 53th Biophysical Society Meeting, Boston, 96, 3, S1  
III. Talks (Updated 02/23/2014)  - “Développement d’une bibliothèque de potentiels pour les simulations de dynamique moléculaires de     détergents avec les champs de forces dérivés d'AMBER".Workshop Orsay (WSOP’13)  04/2013  - “Etudes par simulations de dynamique moléculaire explicites de micelles de dodecyl maltoside:   influence de la conformation de la tête polaire maltose et du champ de forces sur la structure   des agrégats".Journées Modélisation de l'ENS-ENSCP, Paris, 18 - 19 May 2011 (in french)  - “Modélisations et Simulations Moléculaires de Détergents employés pour la solubilisation des protéines Membranaires GDR 3334 « Assemblages supramoléculaires et membranes biologiques » Agde 17 - 21 October 2011 (in french)   - “Etudes par simulations de dynamique moléculaire explicites de micelles de dodecyl maltoside:   influence de la conformation de la tête polaire maltose et du champ de forces sur la structure   des agrégats".Journées Modélisation de l'ENS-ENSCP, Paris, 15 June 2009 (in french)   - “Simulations de dynamique moléculaires des détergents: Applications à l’étude des micelles directes   d’acide gras et de glycolipides” GDR Protéines membranaires, Les Houches, 10-13 March 2009    (in french)  - Structure and Dynamics of AOT and C12E4 Reverse Micelles Studied by Molecular Dynamics Simulations"    (In english) Insitut Laue Langevin Grenoble 12 February 2008 invited by B. Frick  - Simulations de dynamique moléculaires d'un peptide confiné dans des micelles inverses d'AOT    Journées Modélisation de l'ENS-ENSCP, Paris, 16 June 2007 (in french) IV. Book chapter  - “Computational Methods as Tools for the Study of Reverse Micelles Structures and Dynamics: Effect on Confined Biomolecules”. S. Abel and M. Waks, in “Micelles: Structural Biochemistry, Formation and Functions & Usage” (2013) Nova Publisher  ISSBN: 978-1-62948-444-0
Langue:
- “Molecular dynamics simulations of hMRP1 transmembrane segments in different environments”. Presented at the XVIIe congrès du Groupe de Graphisme et Modélisation Moléculaire (GGMM’2011), La Rochelle, France. 30 May - 1 June (Poster in English upon request)
- Derivation and validation of a new set of partial charges for the DPC detergent for MD simulations with the AMBER force fields”.Presented at the CECAM Workshop “Dynamics and Thermodynamics of Bi0omolecular Recognition”, Ecole Polythecnique, Palaiseau, France. May 5 - May 7, 2011 (Poster in English upon request)
- Development of a Force Field Topology Database for Detergents for Molecular dynamics simulations with the Amber Force Fields. 56th Biophysical Society Meeting, San Diego, 96, 3, S1
I. Publications in peer reviewed journals (Updated 10/07/2016)
- Atomistic Simulations of the Surface Coverage of Large Gold Nanocrystals. Ajebaili, T., Richardi, J.,   Abel S. and Marchi M. J. Phys. Chem. C, (2013), 117, 34, pp 17791–17800 (DOI: 10.1021/jp403442s) ( Supp. Info)
- Molecular Dynamics Simulations of hMRP1 Transmembrane Peptides in Different Environments Abel S., Lorieau A., de Foresta B., Dupradeau F-Y and M. Marchi.  BBA-Biomem,(2014), 1, 493-509 (DOI: 10.1016/j.bbamem.2013.10.012) (Supp. Info)
- Interactions of Urea and Trehalose with an Amyloidogenic Peptide Sequence from ß-lactoglobulin 57th Biophysical Society Meeting, Phidaldephie. 104, 2, S1; 2009-POS
- Competitive solubilization of low-molecular-weight polycyclic aromatic hydrocarbons mixtures   in single and binary surfactant micelles. Liang X., Zhang M. , Guo C., Abel S., X. Yi, Lu G., Yang C.    and Dang Z.. Chem. Eng. J (2014), 244, 522-530 (DOI:10.1016/j.cej.2014.01.097) (Supp. Info)  
   -Molecular simulations study of the C12E4 reverse micelles changes with the temperature and pressure.    Abel S.; Waks M.; Marchi M.; Urbach W.; Eur. Biophysical Journal, (2008), 34, , P590    - Molecular simulations of the stability of an alanine octapeptide confined in AOT reverse micelles    Abel S.; Waks M.; Marchi M.; Urbach W.; Biophysical Journal, (2005), 34, 6, P51 (Poster)
- Modeling the Self-Aggregation of Small AOT Reverse Micelles from First-Principles. M. Marchi and S. Abel J. Phys. Chem Letters (2015), 6 (1), pp 170–174 (DOI:10.1021/jz5023619) (Supp. Info)
- Atomistic Simulations of Self-Assembled Monolayers on Octahedral and Cubic Gold Nanocrystals T. Djebaili, J. Richardi, S. Abel, and M. Marchi. J. Phys. Chem. C, (2015), 119 (36), pp 21146–21154 (DOI:10.1021/acs.jpcc.5b05256) (Supp. Info)
- Structure of Bolaamphiphile Sophorolipid Micelles Characterized with SAXS, SANS   and MD Simulations. S. Manet, A.S Cuvier, C. Valotteau,  G.C. Fadda, J. Perez, E. Karakas, S.Abel, and N.Baccile J. Phys. Chem. B, (2015) 109 (41):13113-13133 (DOI:10.1021/acs.jpcb.5b05374) (Supp. Info)
Competitive soulubilization of low molecular weight (LMW) PAH mixtures in single and binary surfactant micelles” (with X.Liang) ISPAC - International Symposium on Polycyclic Aromatic Compounds Conference 13 - 17 September 2015  “USE OF SOPHOROLIPIDS BIOSURFACTANTS AS NANOMATERIAL PRECURSORS: STUDY OF THEIR SELF-ASSEMBLY” (with N. Bacille). Renewable ressources and biorafineries. Satellite Meeting “Biosurfactants” 30 - 2 June (York, GB) 
- Derivation of original RESP atomic partial charges for MD simulations of the LDAO surfactant with AMBER: Applications to a model of micelle and a fragment of the lipid kinase PI4KA. E. Karakas, C.Taveneau, S.Bressanelli, M.Marchi, B.Robert and S.Abel  (2016) JBSD  (DOI:10.1080/07391102.2015.1135822) (Supp. Info)          
- Atomistic Simulation of Solubilization of Polycyclic Aromatic Hydrocarbons in a Sodium Dodecyl Sulfate Micelle. X. Liang, M.Marchi, C. Guo, Z. Dang and S. Abel  (2016) Langmuir 32 (15), pp 3645–3654 (DOI:10.1021/acs.langmuir.6b00182) (Supp. Info)
Publications